Abstract: A waveguide 1.25–1.39 THz Hot Electron Bolometer (HEB) balanced receiver was successfully developed, characterized and installed at the Atacama Pathfinder EXperiment (APEX) telescope. The receiver employs a quadrature balanced scheme using a waveguide 90-degree 3 dB RF hybrid, HEB mixers and a 180-degree IF hybrid. The HEB mixers are based on ultrathin NbN film deposited on crystalline quartz with a MgO buffer layer. Integrated into the multi-channel APEX facility receiver (SHeFI), the results presented here demonstrate exceptional performance; a receiver noise temperature of 1000 K measured at the telescope at the center of the receiver IF band 2-4 GHz, and at an LO frequency of 1294 GHz. Stability of the receiver is fully in line with the SIS mixer bands of the SHeFI, and gives a spectroscopic Allan time of more than 200 s with a noise bandwidth of 1 MHz.